Using available data and the gold standard, assemble training set for the model training.
Usage
X.assemble.traindata(data = NULL, standard = NULL)
Arguments
- data
Data frame with columns 'protein1', 'protein2' and other predictor columns.
- standard
Data frame with columns 'protein1', 'protein2' and 'complex'. The column complex should have values of 1 or 0
for interacting and non-interacting proteins, respectively.
Value
A data frame with complex labels from standard assigned to observed data.
Examples
GS_specific <- X.assemble.traindata(all.predictors[[tp]][[rep]],GS)
#> Error: object 'all.predictors' not found